Protein structure topology comparison based on contact maps.

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Author(s): MELO, R. C.; MAZONI, I.; NESHICH, G.; SANTORO, M. M.; MEIRA JUNIOR, W.

Summary: Short Abstract: Topologs (Topology Homologous) is a tool which is part of the Star Sting Suite (http://sms.cbi.cnptia.embrapa.br/SMS). It is a structural classification of proteins totally based on the pattern of intrachain interactions. Its precision is higher than 85% for all tested fold types and has been precomputed for all ASTRAL 40 chains

Publication year: 2006

Observation

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