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SHIP identifies genomic safe harbors in eukaryotic organisms using genomic general feature annotation. Author(s): LEITÃO, M. de C.; CABRAL, L. S.; PIVA, L. C.; QUEIROZ, P. F. de S.; GOMES, T. G.; ANDRADE, R. V. de; PEREZ, A. L. A.; PAIVA, K. L. R. de; BÁO, S. N.; REIS, V. C. B.; MORAES, L. M. P.; TOGAWA, R. C.; BARROS, L. M. G.; TORRES, F. A. G.; PAPPAS JÚNIOR, G. J.; COELHO, C. M. Integrating foreign genes into loci, allowing their transcription without affecting endogenous gene expression, is the desirable strategy in genomic engineering. However, these loci, known as genomic... ... Repository: BDPA Publication year: 2025
Genome-wide annotation of the soybean WRKY family and functional characterization of genes involved in response to Phakopsora pachyrhizi infection. Author(s): BENCKE-MALATO, M.; CABREIRA, C.; WIEBKE-STROHM, B.; BÜCKER-NETO, L.; MANCINI, E.; OSORIO, M. B.; HOMRICH, M. S.; TURCHETTO-ZOLET, A. C.; CARVALHO, M. C. C. G. de; STOLF, R.; WEBER, R. L. M.; WESTERGAARD, G.; CASTAGNARO, A. P.; ABDELNOOR, R. V.; MARCELINO-GUIMARÃES, F. C.; MARGIS-PINHEIRO, M.; BODANESE-ZANETTINI, M. H. Background: Many previous studies have shown that soybean WRKY transcription factors are involved in the plant response to biotic and abiotic stresses. Phakopsora pachyrhizi is the causal agent of Asi... ... Repository: BDPA Publication year: 2014
Genome annotation of the flat mite Brevipalpus yothersi Baker (Tenuipalpidae). Author(s): NOVELLI, V. M.; NUNES, M. A.; MENDONÇA, R. S. de; FREITAS ASTUA, J.; SINICO, T. E.; LIN, Y. C.; LE, P.; VAN DE PEER, Y.; NAVIA, D. Repository: BDPA Publication year: 2016
Coupling in-depth genome annotations with genome editing technology for harnessing genomic variation to promote precision breeding in tropical soybean. Author(s): SILVA JUNIOR, O. B. da; PESSOA FILHO, M. A. C. de P.; SA, M. E. L.; DEAL, R.; RAGOUSSIS, I.; GRATTAPAGLIA, D.; RECH FILHO, E. L. ABSTRACT: Directional selection during crop domestication and advanced breeding has resulted in significant changes in plant genomes. The extent of intraspecific variation in a crop documents domestic... ... Repository: BDPA Publication year: 2018
Evaluating the accuracy of genomic prediction of growth and wood traits in two Eucalyptus species and their F1 hybrids. Author(s): TAN, B.; GRATTAPAGLIA, D.; MARTINS, G. S.; FERREIRA, K. Z.; SUNDBERG, B.; INGVARSSON, P. K. Repository: BDPA Publication year: 2017
Draft genome sequence of Bacillus thuringiensis strain BrMgv02-JM63, a chitinolytic bacterium isolated from oil-contaminated mangrove soil in Brazil. Author(s): MARCON, J.; TAKETANI, R. G.; DINI-ANDREOTE, F.; MAZZERO, G. I.; SOARES JUNIOR, F. L.; MELO, I. S. de; AZEVEDO, J. L.; ANDREOTE, F. D. Here, we report the draft genome sequence and the automatic annotation of Bacillus thuringiensis strain BrMgv02-JM63. This genome comprises a set of genes involved in the metabolism of chitin and N-ac... ... Repository: BDPA Publication year: 2014
Proteome-wide evolutionary analysis reveals lineage-specific adaptations and improves functional annotation of Schistosoma mansoni proteins. Author(s): SILVA, L.; MARCET-HOUBEN, M.; NAHUM, L.; ZERLOTINI, A.; GALBADÓN, T.; OLIVEIRA, G. In this context, comparative proteomic analysis can shed new light on the evolutionary processes that shaped hostparasite interaction over evolutionary time. Taking advantage of the benefits provided... ... Repository: BDPA Publication year: 2012
Copy number variations and genome-wide associations reveal putative genes and metabolic pathways involved with the feed conversion ratio in beef cattle. Author(s): SANTANA, M. H. de A.; OLIVEIRA JUNIOR, G. A.; CESAR, A. S. M.; FREUA, M. C.; GOMES, R. da C.; SILVA, S. da L.; LEME, P. R.; FUKUMASU, H.; CARVALHO, M. E.; VENTURA, R. V.; COUTINHO, L. L.; KADARMIDEEN, H. N.; FERRAZ, J. B. S. The use of genome-wide association results combined with other genomic approaches may uncover genes and metabolic pathways related to complex traits. In this study, the phenotypic and genotypic data o... ... Repository: BDPA Publication year: 2016
Machado: open source genomics data integration framework. Author(s): MUDADU, M. de A.; ZERLOTINI NETO, A. Abstract. Background: Genome projects and multiomics experiments generate huge volumes of data that must be stored, mined, and transformed into useful knowledge. All this information is supposed to be... ... Repository: BDPA Publication year: 2020
Whole-genome resequencing of common bean elite breeding lines. Author(s): SOUZA, I. P. de; AZEVEDO, B. R. de; COELHO, A. S. G.; SOUZA, T. L. P. O. de; VALDISSER, P. A. M. R.; GOMES-MESSIAS, L. M.; FUNICHELI, B. W.; BRONDANI, C.; VIANELLO, R. P. The expansion of bean genome technologies has prompted new perspectives on generating resources and knowledge essential to research and implementing biotechnological tools for the practical operations... ... Repository: BDPA Publication year: 2023

Showing 1 - 10 of 399 results.

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