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A web-based platform for RNA-Seq data analysis and storage: a case study on soybean gene expression experiments. Author(s): BINNECK, E.; NASCIMENTO, L. S. do The availability of the soybean genome sequence and the rapid evolution of DNA sequencing technologies in recent years bring us exciting new promises for scientific discovery and its conversion into r... ... Repository: BDPA Publication year: 2012
Gene co-expression networks associated with carcass traits reveal new pathways for muscle and fat deposition in Nelore cattle. Author(s): VIGNATO B. S.; COUTINHO, L. L.; POLETI, M. D.; CESAR, A. S. M.; MONCAU, C. T.; REGITANO, L. C. de A.; BALIEIRO, J. C. C. Positively correlated with carcass weight and animal growth, the ribeye area (REA) and the backfat thickness (BFT) are economic important carcass traits, which impact directly on producer's payment. T... ... Repository: BDPA Publication year: 2019
Assessing new tools and best practices for RNA seq data analysis and visualization with iPlant cyberinfrastructure. Author(s): CHOUGULE, K, M.; OLSON, A.; MAGALHAES, J. V. de; VAN BUREN, P.; WANG, L.; WARE, D. Repository: BDPA Publication year: 2015
Transcriptome analysis in Coffea eugenioides, an Arabica coffee ancestor, reveals differentially expressed genes in leaves and fruits. Author(s): YUYAMA, P. M.; REIS JUNIOR, O.; IVAMOTO, S. T.; DOMINGUES, D. S.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; CHARMETANT, P.; LEROY, T.; PEREIRA, L. F. P. Studies in diploid parental species of polyploid plants are important to understand their contributions to the formation of plant and species evolution. Coffea eugenioides is a diploid species that is... ... Repository: BDPA Publication year: 2016
Identificação e caracterização de variantes funcionais no transcriptoma de duodeno em poedeiras. Author(s): IBELLI, A. M. G.; SALMÓRIA, L. A.; TAVERNARI, F. de C.; PEIXOTO, J. de O.; MARCELINO, D. E. P.; DAL PIZZOL, M. S.; CANTAO, M. E.; LEDUR, M. C. Resumo: O aumento no número de trabalhos de sequenciamento de RNA (RNA-Seq) tem permitido que estes dados sejam utilizados em abordagens além da análise de expressão gênica diferencial. Entre elas, po... ... Repository: BDPA Publication year: 2022
Integrative analysis between genome-wide association study and expression quantitative trait Loci reveals bovine muscle gene expression regulatory polymorphisms associated with intramuscular fat and backfat thickness. Author(s): VIGNATO, B. S.; CESAR, A. S. M.; AFONSO, J.; MOREIRA, G. C. M.; POLETI, M. D.; PETRINI, J.; GARCIA, I. S.; CLEMENTE, L. G.; MOURÃO, G. B.; REGITANO, L. C. de A.; COUTINHO, L. L. Understanding the architecture of gene expression is fundamental to unravel the molecular mechanisms regulating complex traits in bovine, such as intramuscular fat content (IMF) and backfat thickness... ... Repository: BDPA Publication year: 2022
Análise de genes diferencialmente expressos em Herbaspirillum seropedicae, estirpe HRC54, cultivado na presença do líquido apoplástico de cana-de-açúcar. Repository: BDPA Publication year: 2016
Novel candidate genes involved in an initial stage of white striping development in broiler chickens. Author(s): PADILHA, S. F.; IBELLI, A. M. G.; PEIXOTO, J. O.; CANTAO, M. E.; MOREIRA, G. C. M.; FERNANDES, L. T.; TAVERNARI, F. C.; MORES, M. A. Z.; BASTOS, A. P. A.; DIAS, L. T.; TEIXEIRA, R. A.; LEDUR, M. C. White striping (WS) is a myopathy characterized by the appearance of white stripes parallel to the muscle fibers in the breast of broiler chickens, composed of adipose and connective tissues. This con... ... Repository: BDPA Publication year: 2024
Transcriptional profile of Herbaspirillum rubrisubalbicans in response of sugarcane apoplastic fluid. Author(s): POLESE, V.; SILVA, P. R. A.; PESSOA, D. D. V.; TADRA-SFEIR, M. Z.; SOUZA, E. M.; ARAUJO, J. L. S. de; BALDANI, J. I.; VIDAL, M. S. Repository: BDPA Publication year: 2018
Putative genes involved in muscle functioning are differentially expressed in Nelore steers divergent for sodium and potassium concentration. Author(s): AFONSO, J.; LINS, L. A.; CASSARO, E. G.; TIZIOTO, P. C.; OLIVEIRA, P. S. N. de O.; DINIZ, W. J. da S.; LIMA, A. O. de; SOUZA, M. M. de; ROCHA, M. I. P.; SILVA, J. V. da; BUSS, C. E.; GROMBONI, C. F.; MOURAO, G. B.; NOGUEIRA, A. R. de A.; COUTINHO, L. L.; REGITANO, L. C. de A. Repository: BDPA Publication year: 2017

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