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Single nucleotide variants and InDels identified from whole-genome re-sequencing of Guzerat, Gyr, Girolando and Holstein cattle breeds. Whole-genome re-sequencing, alignment and annotation analyses were undertaken for 12 sires representing four important cattle breeds in Brazil: Guzerat (multi-purpose), Gyr, Girolando and Holstein (da... ... Repository: BDPA Publication year: 2017
Single nucleotide variants and indels identified from whole-genome resequencing of Gyr, Girolando, and Holstein cattle breeds. Repository: BDPA Publication year: 2017
Detection of potential genetic variants affecting gene function in Guzerat cattle. Guzerat is a dual-purpose breed recognized for important traits to its adaptation to adverse tropical environments such as resistance to parasites, heat tolerance and ability to intake forage with low... ... Repository: BDPA Publication year: 2016
SNP markers found in non-coding regions can distinguish among low-variant genotypes of arabica and other coffee species. Development of efficient and scalable methods for molecular identification of Coffea spp. are necessary to accelerate studies related to the characterization of germplasm for both conservation or bree... ... Repository: BDPA Publication year: 2022
Whole-genome resequencing of common bean elite breeding lines. The expansion of bean genome technologies has prompted new perspectives on generating resources and knowledge essential to research and implementing biotechnological tools for the practical operations... ... Repository: BDPA Publication year: 2023
Genome-wide copy number variation (CNV) detection in Nelore cattle reveals highly frequent variants in genome regions harboring QTLs affecting production traits. Background: Copy number variations (CNVs) have been shown to account for substantial portions of observed genomic variation and have been associated with qualitative and quantitative traits and the on... ... Repository: BDPA Publication year: 2016
Differential allele-specific expression revealed functional variants and candidate genes related to meat quality traits in B. indicus muscle. Abstract: Traditional transcriptomics approaches have been used to identify candidate genes affecting economically important livestock traits. Regulatory variants affecting these traits, however, rema... ... Repository: BDPA Publication year: 2022
Muscle allele-specific expression QTLs may affect meat quality traits in Bos indicus. Abstract. Single nucleotide polymorphisms (SNPs) located in transcript sequences showing allele-specific expression (ASE SNPs) were previously identified in the Longissimus thoracis muscle of a Nelore... ... Repository: BDPA Publication year: 2021
Acurácia de imputação de genótipos para estudos de associação genômica em bovinos da raça Canchim. Repository: BDPA Publication year: 2014
Genome-wide characterization of genetic variants and putative regions under selection in meat and egg-type chicken lines. Abstract: Background Meat and egg-type chickens have been selected for several generations for different traits. Artificial and natural selection for different phenotypes can change frequency of genet... ... Repository: BDPA Publication year: 2018

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