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Initial analysis of copy number variations in canchim beef cattle with extreme phenotypes for ribeye area. Author(s): GIACHETTO, P. F.; PEREIRA, F. C. P.; MOKRY, F. B.; HIGA, R. H.; MUDADU, M. A.; SILVA, M. V.; NICIURA, S. C. M.; CARDOSO, F. F.; ALENCAR, M. M.; MEIRELLES, S. L. C.; LIMA, A. O.; REGITANO, L. C. A. Genomic structural variation, in the form of large-scale insertions and deletions, as well as inversions and translocations, are referred to as copy number variations (CNVs). Compared to single nucleo... ... Repository: BDPA Publication year: 2013
Rice and bean SNP information system. Author(s): NARCISO, M. G.; BORBA, T. Single base polymorphisms or SNPs ("Single nucleotide polymorphisms") are the most common forms of genetic variation in eukaryotic genomes. Being stable and easily analyzed by automated methodologies,... ... Repository: BDPA Publication year: 2011
Genome-wide copy number variation (CNV) detection in Nelore cattle reveals highly frequent variants in genome regions harboring QTLs affecting production traits. Author(s): SILVA, J. M. da; GIACHETTO, P. F.; SILVA, L. O. da; CINTRA, L. C.; PAIVA, S. R.; YAMAGISHI, M. E. B.; CAETANO, A. R. Background: Copy number variations (CNVs) have been shown to account for substantial portions of observed genomic variation and have been associated with qualitative and quantitative traits and the on... ... Repository: BDPA Publication year: 2016
Detection of potential genetic variants affecting gene function in Guzerat cattle. Author(s): ZERLOTINI NETO, A.; STAFUZZA, N. B.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; SILVA, M. V. G. B. Guzerat is a dual-purpose breed recognized for important traits to its adaptation to adverse tropical environments such as resistance to parasites, heat tolerance and ability to intake forage with low... ... Repository: BDPA Publication year: 2016
Single nucleotide variants and InDels identified from whole-genome re-sequencing of Guzerat, Gyr, Girolando and Holstein cattle breeds. Author(s): STAFUZZA, N. B.; ZERLOTINI NETO, A.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; COLE, J. B.; SILVA, M. V. G. B. Whole-genome re-sequencing, alignment and annotation analyses were undertaken for 12 sires representing four important cattle breeds in Brazil: Guzerat (multi-purpose), Gyr, Girolando and Holstein (da... ... Repository: BDPA Publication year: 2017
Identification of copy number variation in Brazilian synthetic dairy cattle breed. Author(s): CHUD, T. C. S.; SILVA, M. V. G. B.; CARMO, A. S.; SILVA, T. B. R.; OLIVEIRA JUNIOR, G. A.; REY, F. S. B.; MUNARI, D. P. Repository: BDPA Publication year: 2015
Detection of copy number variations in nelore beef cattle with high-density SNP genotyping data. Author(s): SILVA, J. M. da; GIACHETTO, P. F.; SILVA, L. O. C. da; PAIVA, S. R.; CAETANO, A. R.; YAMAGISHI, M. E. B. Genome-wide single nucleotide polymorphism (SNP) genotyping platforms have been widely used in studies in diverse areas, ranging from population genetics to applied genetic improvement and breeding. S... ... Repository: BDPA Publication year: 2014
Copy number variations and genome-wide associations reveal putative genes and metabolic pathways involved with the feed conversion ratio in beef cattle. Author(s): SANTANA, M. H. de A.; OLIVEIRA JUNIOR, G. A.; CESAR, A. S. M.; FREUA, M. C.; GOMES, R. da C.; SILVA, S. da L.; LEME, P. R.; FUKUMASU, H.; CARVALHO, M. E.; VENTURA, R. V.; COUTINHO, L. L.; KADARMIDEEN, H. N.; FERRAZ, J. B. S. The use of genome-wide association results combined with other genomic approaches may uncover genes and metabolic pathways related to complex traits. In this study, the phenotypic and genotypic data o... ... Repository: BDPA Publication year: 2016
Linkage and mapping of quantitative trait loci associated with angular leaf spot and powdery mildew resistance in common beans. Author(s): BASSI, D.; BRIÑEZ, B.; ROSA, J. S.; OBLESSUC, P. R.; ALMEIDA, C. P. de; NUCCI, S. M.; SILVA, L. C. D. da; CHIORATO, A. F.; VIANELLO, R. P.; CAMARGO, L. E. A.; BLAIR, M. W.; BENCHIMOL-REIS, L. L. Angular leaf spot (ALS) and powdery mildew (PWM) are two important fungi diseases causing significant yield losses in common beans. In this study, a new genetic linkage map was constructed using singl... ... Repository: BDPA Publication year: 2017
Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing. Author(s): SANTOS, J. V. M. dos; VALLIYODAN, B.; JOSHI, T.; KHAN, S. M.; LIU, YANG.; WANG, J.; VUONG, T. D.; OLIVEIRA, M. F. de; MARCELINO-GUIMARÃES, F. C.; XU, D.; NGUYEN, H. T.; ABDELNOOR, R. V. Soybean [Glycine max (L.) Merrill] is one of the most important legumes cultivated worldwide, and Brazil is one of the main producers of this crop. Since the sequencing of its reference genome, intere... ... Repository: BDPA Publication year: 2016

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