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Initial analysis of copy number variations in canchim beef cattle with extreme phenotypes for ribeye area. Author(s): GIACHETTO, P. F.; PEREIRA, F. C. P.; MOKRY, F. B.; HIGA, R. H.; MUDADU, M. A.; SILVA, M. V.; NICIURA, S. C. M.; CARDOSO, F. F.; ALENCAR, M. M.; MEIRELLES, S. L. C.; LIMA, A. O.; REGITANO, L. C. A. Genomic structural variation, in the form of large-scale insertions and deletions, as well as inversions and translocations, are referred to as copy number variations (CNVs). Compared to single nucleo... ... Repository: BDPA Publication year: 2013
Rice and bean SNP information system. Author(s): NARCISO, M. G.; BORBA, T. Single base polymorphisms or SNPs ("Single nucleotide polymorphisms") are the most common forms of genetic variation in eukaryotic genomes. Being stable and easily analyzed by automated methodologies,... ... Repository: BDPA Publication year: 2011
Genome-wide copy number variation (CNV) detection in Nelore cattle reveals highly frequent variants in genome regions harboring QTLs affecting production traits. Author(s): SILVA, J. M. da; GIACHETTO, P. F.; SILVA, L. O. da; CINTRA, L. C.; PAIVA, S. R.; YAMAGISHI, M. E. B.; CAETANO, A. R. Background: Copy number variations (CNVs) have been shown to account for substantial portions of observed genomic variation and have been associated with qualitative and quantitative traits and the on... ... Repository: BDPA Publication year: 2016
Detection of potential genetic variants affecting gene function in Guzerat cattle. Author(s): ZERLOTINI NETO, A.; STAFUZZA, N. B.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; SILVA, M. V. G. B. Guzerat is a dual-purpose breed recognized for important traits to its adaptation to adverse tropical environments such as resistance to parasites, heat tolerance and ability to intake forage with low... ... Repository: BDPA Publication year: 2016
Single nucleotide variants and InDels identified from whole-genome re-sequencing of Guzerat, Gyr, Girolando and Holstein cattle breeds. Author(s): STAFUZZA, N. B.; ZERLOTINI NETO, A.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; COLE, J. B.; SILVA, M. V. G. B. Whole-genome re-sequencing, alignment and annotation analyses were undertaken for 12 sires representing four important cattle breeds in Brazil: Guzerat (multi-purpose), Gyr, Girolando and Holstein (da... ... Repository: BDPA Publication year: 2017
Identification of copy number variation in Brazilian synthetic dairy cattle breed. Author(s): CHUD, T. C. S.; SILVA, M. V. G. B.; CARMO, A. S.; SILVA, T. B. R.; OLIVEIRA JUNIOR, G. A.; REY, F. S. B.; MUNARI, D. P. Repository: BDPA Publication year: 2015
Detection of copy number variations in nelore beef cattle with high-density SNP genotyping data. Author(s): SILVA, J. M. da; GIACHETTO, P. F.; SILVA, L. O. C. da; PAIVA, S. R.; CAETANO, A. R.; YAMAGISHI, M. E. B. Genome-wide single nucleotide polymorphism (SNP) genotyping platforms have been widely used in studies in diverse areas, ranging from population genetics to applied genetic improvement and breeding. S... ... Repository: BDPA Publication year: 2014
Copy number variations and genome-wide associations reveal putative genes and metabolic pathways involved with the feed conversion ratio in beef cattle. Author(s): SANTANA, M. H. de A.; OLIVEIRA JUNIOR, G. A.; CESAR, A. S. M.; FREUA, M. C.; GOMES, R. da C.; SILVA, S. da L.; LEME, P. R.; FUKUMASU, H.; CARVALHO, M. E.; VENTURA, R. V.; COUTINHO, L. L.; KADARMIDEEN, H. N.; FERRAZ, J. B. S. The use of genome-wide association results combined with other genomic approaches may uncover genes and metabolic pathways related to complex traits. In this study, the phenotypic and genotypic data o... ... Repository: BDPA Publication year: 2016
Linkage and mapping of quantitative trait loci associated with angular leaf spot and powdery mildew resistance in common beans. Author(s): BASSI, D.; BRIÑEZ, B.; ROSA, J. S.; OBLESSUC, P. R.; ALMEIDA, C. P. de; NUCCI, S. M.; SILVA, L. C. D. da; CHIORATO, A. F.; VIANELLO, R. P.; CAMARGO, L. E. A.; BLAIR, M. W.; BENCHIMOL-REIS, L. L. Angular leaf spot (ALS) and powdery mildew (PWM) are two important fungi diseases causing significant yield losses in common beans. In this study, a new genetic linkage map was constructed using singl... ... Repository: BDPA Publication year: 2017
Identification of QTLs in the 'Araguaia' (Oryza sativa subsp. japonica) x 'Maninjau' (Oryza sativa subsp. indica) rice population. Author(s): PRADO, J. F. F. dos S.; CORDEIRO, A. C. C.; COELHO, A. S. G.; VALDISSER, P. A. M. R.; VIANELLO, R. P.; BRONDANI, C. ABSTRACT - The objective of this work was to identify quantitative trait loci (QTLs) associated with the traits grain yield, plant height, and flowering, as well as superior inbred lines resulting fro... ... Repository: BDPA Publication year: 2024

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