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Investigation of the spread bovine tuberculosis in Southern Brazil by Whole-genome sequencing. Author(s): RODRIGUES, R. de A.; ARAUJO, F. R.; ETGES, R. N.; NUNES, T. P. Mycobacterium bovis is the causal agent of bovine tuberculosis, one of the most important diseases currently facing the cattle industry worldwide. Tracing the source of M. bovis infections that result... ... Repository: BDPA Publication year: 2019
Whole Genome Sequencing of the E. oleifera South-American Wild Oil Palm. Author(s): SOUZA JUNIOR, M. T.; CAPDEVILLE, G. de; FORMIGHIERI, E. F.; CAMILLO, J.; ALVES, A. A.; LEAO, A. P. Repository: BDPA Publication year: 2012
Whole-genome resequencing of worldwide wild and domestic sheep Eeucidates genetic diversity, introgression, and agronomically important loci. Author(s): LV, F.-H.; CAO, Y.-H.; LIU, G.-J.; LUO, L.-Y.; LU, R.; LIU, M.-J.; LI, W.-R.; ZHOU, P.; WANG, X.-H.; SHEN, M.; GAO, L.; YANG, J.-Q.; YANG, H.; YANG, Y.-L.; LIU, C.-B.; WAN, P.-C.; ZHANG, Y.-S.; PI, W.-H.; REN, Y.-L.; SHEN, Z.-Q.; WANG, F.; WANG, Y.-T.; LI, J. Q.; SALEHIAN-DEHKORDI, H.; HEHUA, E.; LIU, Y.-G.; CHEN, J.-F.; WANG, J.-K.; DENG, X.-M.; ESMAILIZADEH, A.; DEHGHANI-QANATQESTANI, M.; CHARATI, H.; NOSRATI, M.; STEPANEK, O.; RUSHDI, H. E.; OLSAKER, I.; CURIK, I.; GORKHALI, N. A.; PAIVA, S. R.; CAETANO, A. R.; CIANI, E.; AMILLS, M.; WEIMANN, C.; ERHARDT, G.; AMANE, A.; MWACHARO, J. M.; HAN, J.-L.; HANOTTE, O.; PERIASAMY, K.; JOHANSSON, A. M.; HALLSSON, J. H.; KANTANEN, J.; COLTMAN, D. W.; BRUFORD, M. W.; LENSTRA, J. A.; LI, M.-H. Repository: BDPA Publication year: 2022
NeuroSNP: Tool to Filter SNPs in Whole Genomic DNA. Author(s): ZONOVELLI, B.; BORGES, C. C. H.; ARBEX, W. A. Repository: BDPA Publication year: 2014
Single nucleotide variants and InDels identified from whole-genome re-sequencing of Guzerat, Gyr, Girolando and Holstein cattle breeds. Author(s): STAFUZZA, N. B.; ZERLOTINI NETO, A.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; COLE, J. B.; SILVA, M. V. G. B. Whole-genome re-sequencing, alignment and annotation analyses were undertaken for 12 sires representing four important cattle breeds in Brazil: Guzerat (multi-purpose), Gyr, Girolando and Holstein (da... ... Repository: BDPA Publication year: 2017
Whole-genome resequencing of common bean elite breeding lines. Author(s): SOUZA, I. P. de; AZEVEDO, B. R. de; COELHO, A. S. G.; SOUZA, T. L. P. O. de; VALDISSER, P. A. M. R.; GOMES-MESSIAS, L. M.; FUNICHELI, B. W.; BRONDANI, C.; VIANELLO, R. P. The expansion of bean genome technologies has prompted new perspectives on generating resources and knowledge essential to research and implementing biotechnological tools for the practical operations... ... Repository: BDPA Publication year: 2023
A first generation whole genome RH map of the river buffalo with comparison to domestic cattle. Author(s): AMARAL, M. E. J.; GRANT, J. R.; RIGGS, P. K.; STAFUZZA, N. B.; RODRIGUES FILHO, E. A.; GOLDAMMER, T.; WEIKARD, R.; BRUNNER, R. M.; KOCHAN, K. J.; GRECO, A. J.; JEONG, J.; CAI, Z.; LIN, G.; PRASAD, A.; KUMAR, S.; SARADHI, G. P.; MATHEW, B.; KUMAR, M. A.; MIZIARA, M. N.; MARIANI, P.; CAETANO, A. R.; GALVAO, S. R.; TANTIA, M. S.; VIJH, R. K.; MISHRA, B.; KUMAR, S. B.; PELAI, V. A.; SANTANA, A. M.; FORNITANO, L. C.; JONES, C. B.; TONHATI, H.; MOORE, S.; STOTHARD, P.; WOMACK, J. E. Repository: BDPA Publication year: 2009
SNPs and INDELs in genes involved in lipid metabolism of mammary gland of Zebu breeds identified by whole genome sequencing. Author(s): OLIVEIRA, G.; ROSSE, I.; ASSIS, J.; OLIVEIRA, F.; LEITE, L.; ARAÚJO, F.; SALIM, A.; ZERLOTINI, A.; LOPES, B.; ARBEX, W.; MACHADO, M. A.; PEIXOTO, M. G.; VERNEQUE, R.; MARTINS, M.; COIMBRA, R.; SILVA, M. V.; CARVALHO, M. R. In this context, the objective of this study was to sequence and to map the genome of three Guzerá bulls and three Gir bulls in order to identify zebu-specific variations involved in the lipid metabol... ... Repository: BDPA Publication year: 2015
Genome-wide detection of signatures of selection in indicine and Brazilian locally adapted taurine cattle breeds using whole-genome re-sequencing data. Author(s): PERIPOLLI, E.; REIMER, C.; HA, NGOC-THUY; GEIBEL. J.; MACHADO, M. A.; PANETTO, J. C. do C.; EGITO, A. A. do; BALDI, F.; SIMIANER, H.; SILVA, M. V. G. B. Background: The cattle introduced by European conquerors during the Brazilian colonization period were exposed to a process of natural selection in different types of biomes throughout the country, le... ... Repository: BDPA Publication year: 2020
Assessment of copy number variants in three Brazilian locally adapted cattle breeds using whole-genome re-sequencing data. Author(s): PERIPOLLI, E.; STAFUZZA, N. B.; MACHADO, M. A.; PANETTO, J. C. do C.; EGITO, A. A. do; BALDI, F.; SILVA, M. V. G. B. Further characterization of genetic structural variations should strongly focus on small and endangered local breeds given their role in unraveling genes and structural variants underlying selective p... ... Repository: BDPA Publication year: 2023

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