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Investigation of the spread bovine tuberculosis in Southern Brazil by Whole-genome sequencing. Author(s): RODRIGUES, R. de A.; ARAUJO, F. R.; ETGES, R. N.; NUNES, T. P. Mycobacterium bovis is the causal agent of bovine tuberculosis, one of the most important diseases currently facing the cattle industry worldwide. Tracing the source of M. bovis infections that result... ... Repository: BDPA Publication year: 2019
Genome-wide detection of signatures of selection in indicine and Brazilian locally adapted taurine cattle breeds using whole-genome re-sequencing data. Author(s): PERIPOLLI, E.; REIMER, C.; HA, NGOC-THUY; GEIBEL. J.; MACHADO, M. A.; PANETTO, J. C. do C.; EGITO, A. A. do; BALDI, F.; SIMIANER, H.; SILVA, M. V. G. B. Background: The cattle introduced by European conquerors during the Brazilian colonization period were exposed to a process of natural selection in different types of biomes throughout the country, le... ... Repository: BDPA Publication year: 2020
Assessment of copy number variants in three Brazilian locally adapted cattle breeds using whole-genome re-sequencing data. Author(s): PERIPOLLI, E.; STAFUZZA, N. B.; MACHADO, M. A.; PANETTO, J. C. do C.; EGITO, A. A. do; BALDI, F.; SILVA, M. V. G. B. Further characterization of genetic structural variations should strongly focus on small and endangered local breeds given their role in unraveling genes and structural variants underlying selective p... ... Repository: BDPA Publication year: 2023
Single nucleotide variants and InDels identified from whole-genome re-sequencing of Guzerat, Gyr, Girolando and Holstein cattle breeds. Author(s): STAFUZZA, N. B.; ZERLOTINI NETO, A.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; COLE, J. B.; SILVA, M. V. G. B. Whole-genome re-sequencing, alignment and annotation analyses were undertaken for 12 sires representing four important cattle breeds in Brazil: Guzerat (multi-purpose), Gyr, Girolando and Holstein (da... ... Repository: BDPA Publication year: 2017
New single sucleotide polymorphisms in Guzerá breed revealed by whole-genome re-sequencing. Author(s): CRUZ, I. R.; GERALDO, J. A.; OLIVEIRA, F. S. de; LEITE, L. R.; ARAÚJO, F.; ZERLOTINI, A.; LOPES, B. C.; ARBEX, W. A.; MACHADO, M. A.; PEIXOTO, M. G. C. D.; VERNEQUE, R. da S.; MARTINS, M. F.; SILVA, M. V. G. B.; COIMBAR, R. S.; CARVALHO, M. R. S.; OLIVEIRA, G. The objective of our work was to sequence and assemble the Guzerá genome in order to identify race-specific variations that might be used in breeding programs. Repository: BDPA Publication year: 2013
Whole Genome Sequencing of the E. oleifera South-American Wild Oil Palm. Author(s): SOUZA JUNIOR, M. T.; CAPDEVILLE, G. de; FORMIGHIERI, E. F.; CAMILLO, J.; ALVES, A. A.; LEAO, A. P. Repository: BDPA Publication year: 2012
Examining the cause of high inbreeding depression: analysis of whole-genome sequence data in 28 selfed progeny of Eucalyptus grandis. Author(s): HEDRICK, P. W.; HELLSTEN, U.; GRATTAPAGLIA, D. Repository: BDPA Publication year: 2016
Whole-genome shotgun sequencing of Rhodococcus erythropolis strain p27, a highly radiation-resistant actinomycete from Antarctica. Author(s): TAKETANI, R. G.; ZUCCHI, T. D.; MELO, I. S. de; MENDES, R. This paper reports the project of sequencing the genome of Rhodococcus erythropolis strain P27 radiation resistant, isolated from leaves of Deschampsia antarctica Std. (Poaceae) in the area of Admiral... ... Repository: BDPA Publication year: 2013
New single nucleotide polymorphisms in guzerá breed revealed by whole-genome re-sequencing. Author(s): CRUZ, I. R.; GERALDO, L. A.; OLIVEIRA, F. S. DE; LEITE, L. R.; ARAUJO, F.; ZERLOTINI NETO, A.; LOPES, B. C.; ARBEX, W. A.; MACHADO, M. A.; PEIXOTO, M. G. C. D.; VERNEQUE, R. da S.; MARTINS, M. F.; SILVA, M. V. G. B.; COIMBRA, R. S.; CARVALHO, M. R. S.; OLIVEIRA, G. Repository: BDPA Publication year: 2013
Novel polymorphisms in genes associated with milk and meat production and disease resistance in the Guzerá breed identified by whole-genome sequencing. Author(s): ROSSE, I. C.; ASSIS, J. G.; OLIVEIRA, F. S.; LEITE, L. R.; ARAUJO, F.; ZERLOTINI, A.; LOPES, B. C.; ARBEX, W. A.; MACHADO, M. A.; PEIXOTO, M. G. C. D.; VERNEQUE, R. S.; GUIMARÃES, M. F. M.; SILVA, M. V. G. B.; COIMBRA, R. S.; OLIVEIRA, G.; CARVALHO, M. R. S. In this context, the objective of this work was to sequence and assemble the genome of one Guzerá bull in order to identify breed-specific variations that might be included in the genotyping arrays an... ... Repository: BDPA Publication year: 2014

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