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Genomic variant hotspots in nelore cattle revealed by missing genotypes. Author(s): GIACHETTO, P. F.; SILVA, J. M. da; SILVA, L. O. C. da; CINTRA, L. C.; PAIVA, S. R.; CAETANO, A. R.; YAMAGISHI, M. E. B. In order to investigate whether or not the ?missing? genotypes actually reveal genomic variant hotspots, we examined BovineHD missing genotypes from a total of 1,709 Nelore DNA samples and used sequen... ... Repository: BDPA Publication year: 2015
SNP markers found in non-coding regions can distinguish among low-variant genotypes of arabica and other coffee species. Author(s): BOLÍVAR-GONZÁLEZ, L.; MOLINA-BRAVO, R.; SOLANO-SÁNCHEZ, W.; ARAYA-VALVERDE, E.; IVAMOTO-SUZUKI, S. T.; PEREIRA, L. F. P.; GATICA-ARIAS, A. Development of efficient and scalable methods for molecular identification of Coffea spp. are necessary to accelerate studies related to the characterization of germplasm for both conservation or bree... ... Repository: BDPA Publication year: 2022
Genomic Variants Revealed by Invariably Missing Genotypes in Nelore Cattle. Author(s): SILVA, J. M. da; GIACHETTO, P. F.; SILVA, L. O. C. da; CINTRA, L. C.; PAIVA, S. R.; CAETANO, A. R.; YAMAGISHI, M. E. B. Repository: BDPA Publication year: 2015
Caracterização morfológica e molecular de isolados virais obtidos de larvas do complexo Heliothinae. Author(s): SANTOS, L. A. V. M.; RIBEIRO, Z. M. de A.; GOMES, A. C. M. M.; CRAVEIRO, S. R.; SOARES, C. M. S.; CASTRO, M. E. B. Repository: BDPA Publication year: 2016
Expected Genotype Quality and Diploidized Marker Data from Genotyping-by-Sequencing of Urochloa spp. Tetraploids. Author(s): MATIAS, F. I.; MEIRELES, K. G. X.; NAGAMATSU, S. T.; BARRIOS, S. C. L.; VALE, C. B. do; CARAZZOLLE, M. F.; FRITSCHE-NETO, R.; ENDELMAN, J. B. Although genotyping-by-sequencing (GBS) is a well-established marker technology in diploids, the development of best practices for tetraploid species is a topic of current research. We determined the... ... Repository: BDPA Publication year: 2019
Single nucleotide variants and InDels identified from whole-genome re-sequencing of Guzerat, Gyr, Girolando and Holstein cattle breeds. Author(s): STAFUZZA, N. B.; ZERLOTINI NETO, A.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; COLE, J. B.; SILVA, M. V. G. B. Whole-genome re-sequencing, alignment and annotation analyses were undertaken for 12 sires representing four important cattle breeds in Brazil: Guzerat (multi-purpose), Gyr, Girolando and Holstein (da... ... Repository: BDPA Publication year: 2017
Enumeration, antimicrobial resistance and typing of salmonella enterica: profile of strains carried in the intestinal contents of pigs at slaughter in southern Brazil. Author(s): PAIM, D. S.; PISSETTI, C.; VIEIRA, T. R.; WERLANG, G. O.; COSTA, E. de F.; KICH, J. D.; CARDOSO, M. R. de I. ABSTRACT: Background: Despite a strong association between Salmonella isolation and slaughter hygiene, as measured by the Enterobacteriaceae levels on pre-chill carcass surfaces, a high variation in t... ... Repository: BDPA Publication year: 2019
Whole-genome resequencing of common bean elite breeding lines. Author(s): SOUZA, I. P. de; AZEVEDO, B. R. de; COELHO, A. S. G.; SOUZA, T. L. P. O. de; VALDISSER, P. A. M. R.; GOMES-MESSIAS, L. M.; FUNICHELI, B. W.; BRONDANI, C.; VIANELLO, R. P. The expansion of bean genome technologies has prompted new perspectives on generating resources and knowledge essential to research and implementing biotechnological tools for the practical operations... ... Repository: BDPA Publication year: 2023
Genome-wide copy number variation (CNV) detection in Nelore cattle reveals highly frequent variants in genome regions harboring QTLs affecting production traits. Author(s): SILVA, J. M. da; GIACHETTO, P. F.; SILVA, L. O. da; CINTRA, L. C.; PAIVA, S. R.; YAMAGISHI, M. E. B.; CAETANO, A. R. Background: Copy number variations (CNVs) have been shown to account for substantial portions of observed genomic variation and have been associated with qualitative and quantitative traits and the on... ... Repository: BDPA Publication year: 2016
CKM gene variants in the racing and cutting lines of quarter horses. Author(s): ASSONI, A. D.; PEREIRA, G. L.; ROGATTO, G. M.; MATTEIS, R.; REGITANO, L. C. de A.; CHARDULO, L. A. L.; CURI, R. A. Repository: BDPA Publication year: 2015

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