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Expanding enrichment analysis to the evolutionary space: development and validation of Kegg Orthology enrichMent - Online DetectiOn (KOMODO) to detect biased distribution of enzymatic activities in monophyletic taxa. Author(s): LOBO, F. P. We developed KOMODO (KEgg Orthology enrichMent - Online DetectiOn), a web tool to detect significantly biased distribution of homologous genes across taxa. Repository: BDPA Publication year: 2012
Differential gene expression for elucidating Paspalum regnellii resistance against Spittlebugs (Mahanarva spectabilis). Author(s): MALAGO JUNIOR, W.; GUSMAO, M. R.; VIGNA, B. B. Z. Spittlebugs from Mahanarva genus are pests that cause significant losses in livestock, hindering the production of grasses in Brazil. Repository: BDPA Publication year: 2023
A symbiotic meal containing extruded sorghum and probiotic (Bifidobacterium longum) ameliorated intestinal health markers in individuals with chronic kidney disease: a secondary analysis of a subsample from a previous randomized and controlled clinical trial. Author(s): QUEIROZ, V. A. V. Background: Chronic kidney disease increases uremic toxins concentrations, which have been associated with intestinal dysbiosis. Sorghum bicolor L. Moench has dietary fiber and bioactive compounds, wh... ... Repository: BDPA Publication year: 2024
Genome-wide analysis of the transcriptional response to drought stress in root and leaf of common bean. Author(s): LANNA, A. C.; VALDISSER, P. A. M. R.; BRONDANI, C.; BORBA, T. C. de O.; VIANELLO, R. P. Genes related to the response to drought stress in leaf and root tissue of drought-susceptible (DS) and tolerant (DT) genotypes were characterized by RNA-Seq. In total, 54,750 transcripts, representat... ... Repository: BDPA Publication year: 2020
Outstanding impact of soil tillage on the abundance of soil hydrolases revealed by a metagenomic approach. Abstract: The soil represents the main source of novel biocatalysts and biomolecules of industrial relevance. We searched for hydrolases in silico in four shotgun metagenomes (4,079,223 sequences) obt... ... Repository: BDPA Publication year: 2018
Modulação transcricional de genes associados à fosforilação oxidativa em genótipos contrastantes de feijão-caupi submetidos à desidratação radicular. Author(s): SILVA, K. J. D. e Mitocôndrias são conhecidas como as "estações energéticas" da célula. Elas abrigam o processo de fosforilação oxidativa, através do qual o transporte de elétrons por meio de carreadores é acoplado ao... ... Repository: BDPA Publication year: 2013
A web-based platform for RNA-Seq data analysis and storage: a case study on soybean gene expression experiments. The availability of the soybean genome sequence and the rapid evolution of DNA sequencing technologies in recent years bring us exciting new promises for scientific discovery and its conversion into r... ... Repository: BDPA Publication year: 2012
ESTs from seeds to assist the selective breeding of Jatropha curcas L. for oil and active compounds. Author(s): GESTEIRA, A. da S. We report here on the characterization of a cDNA library from seeds of Jatropha curcas L. at three stages of fruit maturation before yellowing. We sequenced a total of 2200 clones and obtained a set o... ... Repository: BDPA Publication year: 2010
Triagem de hidrolases por metagenômica de solos agrícolas do Norte do Paraná. Hidrolases englobam um grupo de enzimas que catalisam a quebra de ligações covalentes em reação com água; entre elas estão as proteases, amilases, lipases, pectinases, celulases e catalases. Essas enz... ... Repository: BDPA Publication year: 2014
Use of an enrichment analysis strategy to detect potential new drug targets in fungal genomes. Author(s): LOBO, F. P. Fungi are a major class of pathogens in several animal and plant species, having a great agricultural, veterinary and medical importance. The search for anti-fungal drugs is an especially hard task du... ... Repository: BDPA Publication year: 2011

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