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Investigation of the spread bovine tuberculosis in Southern Brazil by Whole-genome sequencing. Author(s): RODRIGUES, R. de A.; ARAUJO, F. R.; ETGES, R. N.; NUNES, T. P. Mycobacterium bovis is the causal agent of bovine tuberculosis, one of the most important diseases currently facing the cattle industry worldwide. Tracing the source of M. bovis infections that result... ... Repository: BDPA Publication year: 2019
Whole-genome resequencing of worldwide wild and domestic sheep Eeucidates genetic diversity, introgression, and agronomically important loci. Author(s): LV, F.-H.; CAO, Y.-H.; LIU, G.-J.; LUO, L.-Y.; LU, R.; LIU, M.-J.; LI, W.-R.; ZHOU, P.; WANG, X.-H.; SHEN, M.; GAO, L.; YANG, J.-Q.; YANG, H.; YANG, Y.-L.; LIU, C.-B.; WAN, P.-C.; ZHANG, Y.-S.; PI, W.-H.; REN, Y.-L.; SHEN, Z.-Q.; WANG, F.; WANG, Y.-T.; LI, J. Q.; SALEHIAN-DEHKORDI, H.; HEHUA, E.; LIU, Y.-G.; CHEN, J.-F.; WANG, J.-K.; DENG, X.-M.; ESMAILIZADEH, A.; DEHGHANI-QANATQESTANI, M.; CHARATI, H.; NOSRATI, M.; STEPANEK, O.; RUSHDI, H. E.; OLSAKER, I.; CURIK, I.; GORKHALI, N. A.; PAIVA, S. R.; CAETANO, A. R.; CIANI, E.; AMILLS, M.; WEIMANN, C.; ERHARDT, G.; AMANE, A.; MWACHARO, J. M.; HAN, J.-L.; HANOTTE, O.; PERIASAMY, K.; JOHANSSON, A. M.; HALLSSON, J. H.; KANTANEN, J.; COLTMAN, D. W.; BRUFORD, M. W.; LENSTRA, J. A.; LI, M.-H. Repository: BDPA Publication year: 2022
Whole-genome resequencing of common bean elite breeding lines. Author(s): SOUZA, I. P. de; AZEVEDO, B. R. de; COELHO, A. S. G.; SOUZA, T. L. P. O. de; VALDISSER, P. A. M. R.; GOMES-MESSIAS, L. M.; FUNICHELI, B. W.; BRONDANI, C.; VIANELLO, R. P. The expansion of bean genome technologies has prompted new perspectives on generating resources and knowledge essential to research and implementing biotechnological tools for the practical operations... ... Repository: BDPA Publication year: 2023
Assessment of copy number variants in three Brazilian locally adapted cattle breeds using whole-genome re-sequencing data. Author(s): PERIPOLLI, E.; STAFUZZA, N. B.; MACHADO, M. A.; PANETTO, J. C. do C.; EGITO, A. A. do; BALDI, F.; SILVA, M. V. G. B. Further characterization of genetic structural variations should strongly focus on small and endangered local breeds given their role in unraveling genes and structural variants underlying selective p... ... Repository: BDPA Publication year: 2023
Single nucleotide variants and InDels identified from whole-genome re-sequencing of Guzerat, Gyr, Girolando and Holstein cattle breeds. Author(s): STAFUZZA, N. B.; ZERLOTINI NETO, A.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; COLE, J. B.; SILVA, M. V. G. B. Whole-genome re-sequencing, alignment and annotation analyses were undertaken for 12 sires representing four important cattle breeds in Brazil: Guzerat (multi-purpose), Gyr, Girolando and Holstein (da... ... Repository: BDPA Publication year: 2017
Genome-wide detection of signatures of selection in indicine and Brazilian locally adapted taurine cattle breeds using whole-genome re-sequencing data. Author(s): PERIPOLLI, E.; REIMER, C.; HA, NGOC-THUY; GEIBEL. J.; MACHADO, M. A.; PANETTO, J. C. do C.; EGITO, A. A. do; BALDI, F.; SIMIANER, H.; SILVA, M. V. G. B. Background: The cattle introduced by European conquerors during the Brazilian colonization period were exposed to a process of natural selection in different types of biomes throughout the country, le... ... Repository: BDPA Publication year: 2020
Whole Genome Sequencing of the E. oleifera South-American Wild Oil Palm. Author(s): SOUZA JUNIOR, M. T.; CAPDEVILLE, G. de; FORMIGHIERI, E. F.; CAMILLO, J.; ALVES, A. A.; LEAO, A. P. Repository: BDPA Publication year: 2012
Accurate genomic prediction of Coffea canephora in multiple environments using whole-genome statistical models. Author(s): FERRÃO, L. F. V.; FERRÃO, R. G.; FERRAO, M. A. G.; FONSECA, A. F. A. da; CARBONETTO, P.; SLEPHENS, M.; FRANCO, A. A. Genomic selection has been proposed as the standard method to predict breeding values in animal and plant breeding. Although some crops have benefited from this methodology, studies in Coffea are stil... ... Repository: BDPA Publication year: 2018
Examining the cause of high inbreeding depression: analysis of whole-genome sequence data in 28 selfed progeny of Eucalyptus grandis. Author(s): HEDRICK, P. W.; HELLSTEN, U.; GRATTAPAGLIA, D. Repository: BDPA Publication year: 2016
Single nucleotide variants and indels identified from whole-genome resequencing of Gyr, Girolando, and Holstein cattle breeds. Author(s): STAFUZZA, N. B.; ZERLOTINI, A.; LOBO, F. P.; YAMAGISHI, M. E. B.; CHUD, T. C. S.; CAETANO, A. R.; MUNARI, D. P.; GARRICK, D. J.; COLE, J. B.; MACHADO, M. A.; MARTINS, M. F.; CARVALHO, M. R.; SILVA, M. V. G. B. Repository: BDPA Publication year: 2017

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