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Binding affinity prediction using a nonparametric regression model based on physicochemical and structural descriptors of the nano-environment for protein-ligand interactions. Author(s): BORRO, L.; YANO, I. H.; MAZONI, I.; NESHICH, G. We propose a new empirical scoring function for binding affinity prediction modeled based on physicochemical and structural descriptors that characterize the nano-environment that encompass both ligan... ... Repository: BDPA Publication year: 2016
A simple and efficient method for predicting protein-protein binding sites. Author(s): HIGA, R. H.; TOZZI, C. L. In this work, we propose a strategy for predicting binding sites by exploiting the characteristic of core and rim regions of binding sites mentioned above, while using simple and well-know pattern rec... ... Repository: BDPA Publication year: 2007
The ER luminal binding protein (BiP) mediates an increase in drought tolerance in soybean and delays drought-induced leaf senescence in soybean and tobacco. Author(s): VALENTE, M. A. S.; FARIA, J. A. Q. A.; SOARES-RAMOS, J. R. L.; REIS, P. A. B.; PINHEIRO, G. L.; PIOVESAN, N. D.; MORAIS, A. T.; MENEZES, C. C.; CANO, M. A. O.; FIETTO, L. G.; LOUREIRO, M. E.; ARAGAO, F. J. L.; FONTES, E. P. B. Repository: BDPA Publication year: 2009
Improving binding affinity prediction by using a rule-based model with physical-chemical and structural descriptors of the nano-environment for protein-ligand interactions. Author(s): BORRO, L. C.; SALIM, J. A.; MAZONI, I.; YANO, I.; JARDINE, J. G.; NESHICH, G. In order to improve binding affinity prediction, we developed a new scoring function, named STINGSF, derived from physical-chemical and structural features that describe the protein-ligand interaction... ... Repository: BDPA Publication year: 2015
The resistance of the cowpea cv. BRS Xiquexique to infestation by cowpea weevil is related to the presence of toxic chitin-binding proteins. Author(s): FERREIRA, S. R.; ROCHA, M. de M.; SILVA, K. J. D. e; FERREIRA, A. T. S.; PERALES, J.; FERNANDES, K. V. S.; OLIVEIRA, A. E. A. The cowpea weevil (Callosobruchus maculatus) is the main pest that attacks cowpea (Vigna unguiculata) seedsb during storage, causing nutritional and economic losses in the cowpea crop. Thus, studies a... ... Repository: BDPA Publication year: 2021
Seminal plasma heparin binding protein (HBP) in Gyr bulls and its association with andrological characteristics. Author(s): FOLHADELLA, I.; CAMARGO, L. S. de A.; CASTRO, T. S.; SALVADOR, D. F.; SA, W. F. de; FERREIRA, A. M.; ANDRADE, V. J.; VALE FILHO, V. R. Bulls subfertility represents a negative impact in beef and milk cattle industry. Bulls with normal breeding soundness evaluation (BSE) have different fertility profiles that may be associated with di... ... Repository: BDPA Publication year: 2008
Identification of midgut membrane proteins from different instars of Helicoverpa armigera (Lepidoptera: Noctuidae) that bind to Cry1Ac toxin. Author(s): SILVA, I. H. S. da; GOMÉZ, I.; SÁNCHEZ, J.; CASTRO, D. L. M. de; VALICENTE, F. H.; SOBERÓN, M.; POLANCZYK, R. A.; BRAVO, A. Helicoverpa armigera is a polyphagous pest sensitive to Cry1Ac protein from Bacillus thuringiensis (Bt). The susceptibility of the different larval instars of H. armigera to Cry1Ac protoxin showed a s... ... Repository: BDPA Publication year: 2018
Genetic variability and natural selection at the ligand domain of the Duffy binding protein in Brazilian Plasmodium vivax populations. Author(s): SOUSA, T. N.; TARAZONA-SANTOS, E. M.; WILSON, D. J.; MADUREIRA, A. P.; FALCAO, P. R. K.; FONTES, C. J. F.; GIL, L. H. S.; FERREIRA, M. U.; CARVALHO, L. H.; BRITO, C. F. A. Background. Plasmodium vivax malaria is a major public health challenge in Latin America, Asia and Oceania, with 130-435 million clinical cases per year worldwide. Invasion of host blood cells by P. v... ... Repository: BDPA Publication year: 2010
Transcriptome-based identification of highly similar odorant-binding proteins among neotropical stink bugs and their egg parasitoid. Author(s): FARIAS, L. R.; SCHIMMELPFENG, P. H. C.; TOGAWA, R. C.; COSTA, M. M. do C.; GRYNBERG, P.; MARTINS, N. F.; BORGES, M.; MORAES, M. C. B.; LAUMANN, R. A.; BÁO, S. N.; PAULA, D. P. Olfaction plays a fundamental role in insect survival through resource location and intra and interspecific communications. We used RNA-Seq to analyze transcriptomes for odorant-binding proteins (OBPs... ... Repository: BDPA Publication year: 2015
Odorant binding protein as a management target for Ceratitis capitata: a window of opportunities for in vivo/in silico integration. Author(s): GUIMARÃES, R. P.; SANTOS, V. C.; PARANHOS, B. A. G.; AQUINO, N. C.; NASCIMENTO, R. R.; ALENCAR FILHO, E. B. Ceratitis capitata, known as Mediterranean fruit fly, represents one of the main problems to the agricultural production, due the ability to infest a wide variety of fruits, which makes it one of the... ... Repository: BDPA Publication year: 2025

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