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Is a genome a codeword of an error-correcting code? Author(s): FARIA, L. C. B.; ROCHA, A. S. L.; KLEINSCHMIDT, J. H.; SILVA-FILHO, M. C.; BIM, E.; HERAI, R. H.; YAMAGISHI, M. E. B.; PALAZZO JÚNIOR, R. Since a genome is a discrete sequence, the elements of which belong to a set of four letters, the question as to whether or not there is an error-correcting code underlying DNA sequences is unavoidabl... ... Repository: BDPA Publication year: 2012
BASiNET - Biological Sequences NETwork: a case study on coding and non-coding RNAs identification. Author(s): ITO, E. A.; KATAHIRA, I.; VICENTE, F. F. da R.; PEREIRA, L. F. P.; LOPES, F. M. With the emergence of Next Generation Sequencing (NGS) technologies, a large volume of sequence data in particular de novo sequencing was rapidly produced at relatively low costs. In this context, com... ... Repository: BDPA Publication year: 2018
Aplicação de Qr-Code na rastreabilidade de pescados. Author(s): FEIDEN, A.; ALVES, A. M.; FEIDEN, A. Resumo: A rastreabilidade tem sido uma exigência cada vez maior do mercado consumidor de alimentos, em virtude de incidentes relativos a contaminações de diversas formas.Para algumas empresas a rastre... ... Repository: BDPA Publication year: 2019
Long non-coding RNAs differentially expressed in swine fetuses. Author(s): CAMPOS, F. G.; IBELLI, A. M. G.; CANTAO, M. E.; OLIVEIRA, H. C.; PEIXOTO, J. de O.; LEDUR, M. C.; GUIMARÃES, S. E. F. Long non-coding RNAs (lncRNAs) are non-coding transcripts involved in various biological processes. The Y chromosome is known for determining the male sex in mammals. LncRNAs on the Y chromosome may p... ... Repository: BDPA Publication year: 2024
Improved SAS codes for life table analysis of arthropod populations. Author(s): MAIA, A. de H. N.; LUIZ, A. J. B.; PERVEZ, A. Abstract: Fertility life table (FLT) analysis of arthropod populations can capture chronicle sub lethal effects not detected by acute survival assays (MARINHO-PRADO, 2011; NASCIMENTO et al., 1998; NAR... ... Repository: BDPA Publication year: 2014
Is a non-synonymous SNP in the HvAACT1 coding region associated with acidic soil tolerance in barley? Author(s): FERREIRA, J. R.; FARIA, B. F.; JUNIOR, M. C.; DELATORRE, C. A.; MINELLA, E.; PEREIRA, J. F. The barley HvAACT1 gene codes for a citrate transporter associated with tolerance to acidic soil. In this report, we describe a single nucleotide polymorphism (SNP) in the HvAACT1 coding region that w... ... Repository: BDPA Publication year: 2017
SNP markers found in non-coding regions can distinguish among low-variant genotypes of arabica and other coffee species. Author(s): BOLÍVAR-GONZÁLEZ, L.; MOLINA-BRAVO, R.; SOLANO-SÁNCHEZ, W.; ARAYA-VALVERDE, E.; IVAMOTO-SUZUKI, S. T.; PEREIRA, L. F. P.; GATICA-ARIAS, A. Development of efficient and scalable methods for molecular identification of Coffea spp. are necessary to accelerate studies related to the characterization of germplasm for both conservation or bree... ... Repository: BDPA Publication year: 2022
SAS codes for quantifying influence of the El Niño/Southern oscillation phenomenon on climate variable distributions. Author(s): MAIA, A. de H. N. El Niño/Southern oscillation (ENSO) is an oceanic/athmospheric phenomenon related to warming or cooling of the Equatorial Pacific Ocean, known to influence climate variables worldwide via teleconnecti... ... Repository: BDPA Publication year: 2016
POTION: an end-to-end pipeline for positive Darwinian selection detection in genome-scale data through phylogenetic comparison of protein-coding genes. Author(s): HONGO, J. A.; CASTRO, G. de; CINTRA, L.; ZERLOTINI, A.; LOBO, F. We present POTION, an open source, modular and end-to-end software for genome-scale detection of positive Darwinian selection in groups of homologous coding sequences. Our software represents a key st... ... Repository: BDPA Publication year: 2015
Some Coffea liberica SH3-LRR-coding sequences are highly distinguishable. Author(s): ANGELO, P. C. da S.; PEREIRA, L. F. P.; SERA, G. H.; CAIXETA, E. T. Genes in coffee SH3 loci are involved in the interaction with the fungus Hemileia vastatrix. Previously we found, by comparison to data published for C. arabica ?IAPAR 59?, that SH3 loci are multi-ale... ... Repository: BDPA Publication year: 2022

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