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Contacts as the key elements for comparing two protein structures. Short Abstract: TopSiMap (Topological Similarity Map) is and interactive tool which is part of the Star Sting Suite (http://sms.cbi.cnptia.embrapa.br/SMS).As contacts pattern is very conserved in each... ... Repository: BDPA Publication year: 2006
MSSP: simultaneous comparison of the same structure descriptor for different protein structures. Short Abstract: The Multiple Structures - Single Parameter STING module allows a user to compare variety of structure parameters from different protein structures in a simple yet intuitive 2D pilot. T... ... Repository: BDPA Publication year: 2006
Structural analysis of the protein twitching motility. Short Abstract: We have concentrated our effort in understanding some crucial features of protein Twitching Motility of Xylella fastidiosa. Our study is based on the model of this protein, constructed... ... Repository: BDPA Publication year: 2006
Protein structure topology comparison based on contact maps. Short Abstract: Topologs (Topology Homologous) is a tool which is part of the Star Sting Suite (http://sms.cbi.cnptia.embrapa.br/SMS). It is a structural classification of proteins totally based on th... ... Repository: BDPA Publication year: 2006
An integrated database of structural parameters for protein analysis. Short Abstract: STING_DB is a relational database composed of structural parameters for protein analysis operating with a collection of both publicly available data (PDB, HSSP, Prosite) and its own da... ... Repository: BDPA Publication year: 2006
Using linear algebra for protein structural comparison and classification. In this article, we describe a novel methodology to extract semantic characteristics from protein structures using linear algebra in order to compose structural signature vectors which may be used eff... ... Repository: BDPA Publication year: 2009
Predicting enzyme class from protein structure using Bayesian classification. ABSTRACT. Predicting enzyme class from protein structure parameters is a challenging problem in protein analysis. We developed a method to predict enzyme class that combines the strengths of statistic... ... Repository: BDPA Publication year: 2006
BlueStar STING platform for analysis of protein structure / function relationship: designing agrochemicals to fit new protein targets for bacterial, fungal and insect control. Blue Star STING suite of programs for comprehensive analysis of structure, function and stability of proteins and their complexes, has matured over a decade of development. We will present the in sili... ... Repository: BDPA Publication year: 2012
Electrostatic potential calculation for biomolecules - creating a database of pré-calculated values reported on a per residue basis for all PDB protein structures. Abstract. STING and JavaProtein Dossier provide a collection of physical-chemical parameters, describing protein structure, stability, function, and interaction, considered one of the most comprehensi... ... Repository: BDPA Publication year: 2007
The Star STING server: a multiplatform environment for protein structure analysis. ABSTRACT. Star STING is the latest version of the STING suite of programs and corresponding database. We report on five important aspects of this package that have acquired some new characteristics, d... ... Repository: BDPA Publication year: 2006

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