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High-throughput sequencing applied for the identification of viruses infecting grapevines in Brazil and genetic variability analysis. Author(s): FAJARDO, T. V. M.; SILVA, F. N.; EIRAS, M.; NICKEL, O. The application of high-throughput sequencing technologies (HTS) enables the recovery of many nucleotide sequence fragments from diseased plants and may help in pathogen identification. This study was... ... Repository: BDPA Publication year: 2017
High-throughput and cost-effective chicken genotyping using next-generation sequencing. Author(s): PÉRTILLE, F.; BOSAGNA, C. G.; SILVA, V. H. da; BOSCHIERO, C.; NUNES, J. de R. da S.; LEDUR, M. C.; JENSEN, P.; COUTINHO, L. L. Chicken genotyping is becoming common practice in conventional animal breeding improvement. Despite the power of high-throughput methods for genotyping, their high cost limits large scale use in anima... ... Repository: BDPA Publication year: 2016
Determination of the grapevine virome by high-throughput sequencing and grapevine viruses detection in Serra Gaúcha, Brazil. Author(s): FAJARDO, T. V. M.; Bertocchi, A. A.; NICKEL, O. Among grapevine (Vitis spp.) pathogens, viruses stand out, considering that this fruit plant is broadly susceptible to them and that they cause several diseases, reducing quality and yield of grape pr... ... Repository: BDPA Publication year: 2020
Analysis of virome by high-throughput sequencing disclosed multiple infection in a single grapevine plant. Author(s): FAJARDO, T. V. M.; NHANI JUNIOR, A.; NICKEL, O. Among phytosanitary problems of the grapevine, viruses stand out for their capacity of reducing the quality and yield of grapes. however, detecting and identifying viral infections in grapevines can b... ... Repository: BDPA Publication year: 2023
High-throughput sequencing of black pepper root transcriptome. Author(s): GORDO, S. M. C.; PINHEIRO, D. G.; MOREIRA, E. C. O.; RODRIGUES, S. M.; POLTRONIERI, M. C.; LEMOS, O. F. de; SILVA, I. T. da; RAMOS, R. T. J.; SILVA, A.; SCHNEIDER, H.; SILVA JUNIOR, W. A.; SAMPAIO, I.; DARNET, S. Black pepper (Piper nigrum L.) is one of the most popular spices in the world. It is used in cooking and the preservation of food and even has medicinal properties. Losses in production from disease a... ... Repository: BDPA Publication year: 2012
Double-stranded RNA high-throughput sequencing reveals a new Cytorhabdovirus in a bean golden mosaic virus-resistant common bean transgenic line. Author(s): ALVES-FREITAS, D. M. T.; PINHEIRO-LIMA, B.; FARIA, J. C.; LACORTE, C.; RIBEIRO, S. G.; MELO, F. L. Using double-strand RNA (dsRNA) high-throughput sequencing, we identified five RNA viruses in a bean golden mosaic virus (BGMV)-resistant common bean transgenic line with symptoms of viral infection.... ... Repository: BDPA Publication year: 2019
High-throughput targeted genotyping using next-generation sequencing applied in Coffea canephora breeding. Author(s): ALKIMIM, E. R.; CAIXETA, E. T.; SOUSA, T. V.; SILVA, F. L. da; SAKYAMA, N. S.; ZAMBOLIM, L. The use of molecular markers to detect polymorphism at DNA level is one of the most significant developments in molecular biology techniques. With the development of new next-generation sequencing tec... ... Repository: BDPA Publication year: 2018
In silico detection of a defective genomic RNA of Grapevine leafroll-associated virus 4 strain 5 in High-Throughput Sequencing data. Author(s): SILVA, J. M. F.; BLAWID, R.; NAGATA, T.; FAJARDO, T. V. M. Grapevine leafroll disease (GLRD) is one of the most economically important viral diseases affecting grapevines (Maliogka et aI., 2015). Repository: BDPA Publication year: 2018
Comparative characterization of the archaeal community in the amazon forest: native forest and oil palm plantation by high-throughput sequencing. Author(s): DOMENECH, D.; CANTAO, M. E.; COSTA, O. Y.; CARVALHO B. J.; KYAW, C. M.; KRUGER, R. H.; QUIRINO, B. F. Repository: BDPA Publication year: 2014
Identification of candidate genes for drought tolerance in coffee by high-throughput sequencing in the shoot apex of different Coffea arabica cultivars. Author(s): MOFATTO, L. S.; CARNEIRO, F. de A.; VIEIRA, N. G.; DUARTE, K. E.; VIDAL, R. O.; ALEKCEVETCH, J. C.; COTTA, M. G.; VERDEIL, J-L.; LAPEYRE-MONTES, F.; LARTAUD, M.; LEROY, T.; DE BELLIS, F.; POT, D; RODRIGUES, G. C.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; ANDRADE, A. C.; MARRACCINI, P. BACKGROUND: Drought is a widespread limiting factor in coffee plants. It affects plant development, fruit production, bean development and consequently beverage quality. Genetic diversity for drought... ... Repository: BDPA Publication year: 2016

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