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Contacts as the key elements for comparing two protein structures. Short Abstract: TopSiMap (Topological Similarity Map) is and interactive tool which is part of the Star Sting Suite (http://sms.cbi.cnptia.embrapa.br/SMS).As contacts pattern is very conserved in each... ... Repositório: BDPA Ano de publicação: 2006
MSSP: simultaneous comparison of the same structure descriptor for different protein structures. Short Abstract: The Multiple Structures - Single Parameter STING module allows a user to compare variety of structure parameters from different protein structures in a simple yet intuitive 2D pilot. T... ... Repositório: BDPA Ano de publicação: 2006
Electrostatic potential calculation for biomolecules - creating a database of pré-calculated values reported on a per residue basis for all PDB protein structures. Abstract. STING and JavaProtein Dossier provide a collection of physical-chemical parameters, describing protein structure, stability, function, and interaction, considered one of the most comprehensi... ... Repositório: BDPA Ano de publicação: 2007
The Star STING server: a multiplatform environment for protein structure analysis. ABSTRACT. Star STING is the latest version of the STING suite of programs and corresponding database. We report on five important aspects of this package that have acquired some new characteristics, d... ... Repositório: BDPA Ano de publicação: 2006
Predicting enzyme class from protein structure using Bayesian classification. ABSTRACT. Predicting enzyme class from protein structure parameters is a challenging problem in protein analysis. We developed a method to predict enzyme class that combines the strengths of statistic... ... Repositório: BDPA Ano de publicação: 2006
BlueStar STING platform for analysis of protein structure / function relationship: designing agrochemicals to fit new protein targets for bacterial, fungal and insect control. Blue Star STING suite of programs for comprehensive analysis of structure, function and stability of proteins and their complexes, has matured over a decade of development. We will present the in sili... ... Repositório: BDPA Ano de publicação: 2012
Signature contact coordination patterns for secondary structure elements in protein structures. We present here analysis of pre-calculated values for the cross-links, previously stored in the STING_RDB. Repositório: BDPA Ano de publicação: 2008
Development of a suite of bioinformatics tools for the analysis and prection of membrane protein structure. This thesis describes the development of a novel approach for prediction of the three-dimensional structure of transmembrane regions of membrane proteins directly from amino acid sequence and basic tr... ... Repositório: BDPA Ano de publicação: 2006
Protein ligand contacts analyzed in an integrated environment with the other sequence and structure related parameters. Short Abstract: The Protein Ligand Contacts ? the new STING module allows a user to compare the contacts established between the ligand and the protein together with the variety of other structure par... ... Repositório: BDPA Ano de publicação: 2006
Protein structure topology comparison based on contact maps. Short Abstract: Topologs (Topology Homologous) is a tool which is part of the Star Sting Suite (http://sms.cbi.cnptia.embrapa.br/SMS). It is a structural classification of proteins totally based on th... ... Repositório: BDPA Ano de publicação: 2006

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