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Análise de dados de RNA-Seq utilizando o Galaxy. Author(s): ZERLOTINI NETO, A.; CINTRA, L. C. Neste documento, serão apresentados métodos computacionais para facilitar o processo de análise de dados de RNA-Seq, por meio de ferramentas acessíveis via navegadores. Esta metodologia possibilita o... ... Repository: BDPA Publication year: 2016
RNA-Seq Analysis of Eucalyptus Genotypes that Differ in Carbon Allocation. Author(s): GERHARDT, I. R.; GIACHETTO, P. F.; YAMAGISHI, M. E. B.; LOBO, F. P.; PENCHEL, R. M.; MISSIAGGIA, A. A.; ZERTOLINI, A.; SILVA, F. R. da Repository: BDPA Publication year: 2012
RNA-seq analysis of the Rhizobium tropici CIAT 899 Transcripitome shows similarites in the activation patterns of symbiotic genes in the presence of apigenin and salt. Author(s): PÉREZ-MONTAÑO, F.; CERRO, P. del; JIMÉNEZ-GUERRERO, I.; LÓPEZ-BAENA, F. J.; CUBO, M. T.; HUNGRIA, M.; MEGÍAS, M.; OLLERO, F. J. Rhizobium tropici strain CIAT 899 establishes effective symbioses with several legume species, including Phaseolus vulgaris and Leucaena leucocephala. This bacterium synthesizes a large variety of nod... ... Repository: BDPA Publication year: 2016
Transferibilidade de marcadores microssatélites desenvolvidos a partir de RNA-Seq de amendoim forrageiro. Author(s): OLIVEIRA, J. C. de; SILVA, A. L. D. da; SILVA, C. C. da; SOUZA, A. P. de; FORMIGHIERI, E. F.; SILVA, L. M. da; CAMPOS, T. de O amendoim forrageiro (Arachis pintoi) apresenta destaque expressivo que traduz a sua importância econômica e ambiental em pastagens. Porém, ainda são poucas as variedades disponíveis para cultivo. O... ... Repository: BDPA Publication year: 2021
Using Galaxy to facilitate RNA-Seq analysis. Author(s): NAGAI, L. A. E.; SILVA, F. R.; CINTRA, L. C.; GIACHETTO, P. F.; ZERLOTINI NETO, A. In this experiment, two RNA-Seq datasets were analyzed in order to evaluate both, the Galaxy platform and the RNA-Seq analysis suite. We were able to observe that such combination of softwares is real... ... Repository: BDPA Publication year: 2012
Caracterização de bibliotecas de RNA-Seq de amendoim forrageiro para o desenvolvimento de novos microssatélites. Author(s): OLIVEIRA, J. C. de; SILVA, A. L. D. da; SILVA, C. C. da; SOUZA, A. P. de; FORMIGHIERI, E. F.; CAMPOS, T. de O uso do amendoim forrageiro (Arachis pintoi) em pastagens consorciadas com gramíneas tem importância econômica e ambiental. Avanços no programa de melhoramento da espécie podem ser obtidos com a ampl... ... Repository: BDPA Publication year: 2020
Transcriptome profiling of twonear-isogenic rice lines infected by Magnaporthe oryzae using RNA-SEQ. Author(s): BEVITORI, R.; TOGAWA, R. C.; COSTA, M. M.; GRYNBERG, P.; GUIMARÃES, L. S. M.; ABREU, A. G. de; MELLO, R.; GROSSI DE SÁ, M. F. The research described here focused on early signaling events involved in the expression of rice genes in plants infected with M. oryzae using RNA-Seq technique for differential gene expression we ana... ... Repository: BDPA Publication year: 2015
Molecular, behavioral and anatomical sophistication in spider webs: insights from spinning gland RNA-seq experiments in primitive and modern spiders. Author(s): PROSDOCIMI, F.; BITTENCOURT, D.; SILVA, F. R. D.; MOTTA, P. C.; RECH, E. RNA-seq experiments conducted in 454 sequencers were carried out to produce 87.000 short-reads representing the transcriptome of two spiders?spinning glands. We produced sequences from (i) Actinopus s... ... Repository: BDPA Publication year: 2010
A web-based platform for RNA-Seq data analysis and storage: a case study on soybean gene expression experiments. Author(s): BINNECK, E.; NASCIMENTO, L. S. do The availability of the soybean genome sequence and the rapid evolution of DNA sequencing technologies in recent years bring us exciting new promises for scientific discovery and its conversion into r... ... Repository: BDPA Publication year: 2012
Molecular, behavioral and anatomical sophistication in spider webs: insights from spinning gland RNA-seq experiments in primitive and modern spiders. Author(s): PROSDOCIMI, F.; BITTENCOURT, D. M. de C.; SILVA, F. R. D.; MOTTA, P. C.; RECH FILHO, E. L. RNA-seq experiments conducted in 454 sequencers were carried out to produce 87.000 short-reads representing the transcriptome of two spiders'spinning glands. We produced sequences from (i) Actinopus s... ... Repository: BDPA Publication year: 2010

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